SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G016700

Description hypothetical protein

Gene interval Chr03:1683395–1688893 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features461Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records17

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0369.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

461 matching features · page 41 of 47

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46681 Selanc 751.4280 19.786e-12
P46797 No candidate annotation 355.6493 13.595e-11
P46925 3-Hydroxyisorenieratene 544.3721 17.75e-11
P46985 2,6-Dimethylphenol 122.0719 17.022e-11
P47047 Candicanoside A 720.4106 11.23e-11
P47070 Methyl (2E)-2-(10,13-dimethyl-11-oxo-3-pyrrolidin-1-yl-2,7,8,9,12,14,15,16-octahydro-1H-cyclopenta[a]phenanthren-17-ylidene)acetate 409.2662 11.402e-11
P47122 3-[1-[3-(Dimethylamino)propyl]-5-methoxy-1H-indol-3-yl]-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione 442.2002 16.966e-11
P47365 No candidate annotation 460.7583 19.437e-11
P47482 No candidate annotation 886.3626 15.179e-11
P47516 Alanylproline 186.1018 12.641e-11