SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G296200

Description hypothetical protein

Gene interval Chr02:47383044–47395946 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features282Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

282 matching features · page 17 of 29

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31675 N-Deisopropyl-fluvastatin 369.1340 18.205e-11
P31816 Eremofortin E 335.1381 11.307e-11
P31881 Cochinchinenin 514.2012 19.689e-11
P32263 4-Hydroxydemethylmedicarpin 272.0676 11.098e-12
P32295 Poricoic acid G 486.3328 13.619e-12
P32329 1-Methyl-2-n-hexylbenzene 176.1546 12.723e-11
P32702 Momordin Ia 778.4458 14.167e-11
P32883 1-(9Z-octadecenoyl)-2-(9-oxo-nonanoyl)-sn-glycero-3-phosphoethanolamine 633.3895 16.679e-13
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 14.176e-14
P32907 No candidate annotation 850.3569 18.292e-11