Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32295

Metabolite ID
P32295
Deionized mass
486.3328 Da
Average m/z
487.3360
Average RT
16.6201
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
69
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

69 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)5.658e-11
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)4.796e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.26e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.515e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.515e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.75e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.285e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.099e-11
Glyma.01G152900 hypothetical protein NA 1Chr01:49006714–49014546 (+)9.565e-11
Glyma.01G153200 hypothetical protein AT1G31730:AT1G31730:Adaptin family protein 1Chr01:49031976–49040525 (+)6.844e-11
Glyma.01G153300 hypothetical protein AT5G45340:CYP707A3:cytochrome P450, family 707, subfamily A, polypeptide 3__AT4G19230:CYP707A1:cytochrome P450, family … 1Chr01:49049375–49052359 (-)3.44e-12
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)6.183e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)6.199e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)3.619e-12
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)3.619e-12
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)3.082e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.289e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.511e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.948e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.651e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.817e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.822e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.822e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.152e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)3.84e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)7.128e-12
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)9.618e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.258e-12
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)1.022e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)7.568e-12
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)7.568e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.099e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.849e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.849e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.849e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.26e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.835e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)4.573e-13
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.936e-11
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)9.123e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.59e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.59e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.515e-12
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr13:25483702–25502265 (+)5.916e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.284e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.284e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.284e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.143e-15
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)4.06e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.046e-13
Glyma.15G048800 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:3852038–3855379 (+)6.588e-15
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)1.329e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.448e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.661e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)5.658e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)5.658e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.215e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)8.869e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.833e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)7.469e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.613e-11
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)4.733e-13
Glyma.18G257800 hypothetical protein NA 1Chr18:54346048–54349189 (+)3.562e-15
Glyma.18G259000 hypothetical protein NA 1Chr18:54442402–54446789 (-)2.101e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.892e-11
Glyma.18G268900 hypothetical protein AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 1Chr18:55259873–55265930 (-)8.179e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.185e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.185e-12
Glyma.19G137700 hypothetical protein NA 1Chr19:39904075–39916887 (+)2.385e-12