SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G126400

Description hypothetical protein

Gene interval Chr02:12678071–12683492 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features73Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0274.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

73 matching features · page 3 of 8

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17383 No candidate annotation 639.2260 15.679e-11
P17680 Glycosmisic acid 372.1197 11.078e-13
P17845 Orientin 4'-O-glucoside-2''-O-rhamnoside 756.2150 12.589e-11
P17942 Musacin E 156.0782 19.606e-11
P18070 Cymbidine A 949.4154 11.394e-11
P18837 Ipanguline B2 435.1855 12.801e-11
P19675 No candidate annotation 518.0099 16.185e-11
P20755 Neo-S-petasin 334.1597 16.575e-11
P20999 Chrysophanol 1-tetraglucoside 902.2685 12.637e-11
P21577 Foliachinenoside D 932.2818 15.764e-11