Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18837

Metabolite ID
P18837
Deionized mass
435.1855 Da
Average m/z
436.1924
Average RT
12.8548
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
114
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

114 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.861e-15
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)9.634e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.354e-20
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.05e-13
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)1.716e-11
Glyma.02G121500 hypothetical protein NA 2Chr02:12065640–12082937 (+)1.687e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)3.937e-12
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)2.123e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.147e-13
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)4.282e-14
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)8.487e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.317e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.317e-15
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.861e-15
Glyma.01G009700 hypothetical protein NA 1Chr01:952611–956924 (+)8.486e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)9.634e-11
Glyma.01G154500 hypothetical protein AT1G31780:AT1G31780:oligomeric golgi complex subunit 1Chr01:49196540–49201707 (+)7.578e-11
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)5.769e-11
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)5.769e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.79e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)8.155e-13
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)3.649e-11
Glyma.02G121600 hypothetical protein AT1G26310:CAL:K-box region and MADS-box transcription factor family protein 1Chr02:12084714–12089043 (+)2.725e-11
Glyma.02G125400 hypothetical protein AT1G68910:WIT2:WPP domain-interacting protein 2 1Chr02:12529368–12536281 (+)2.715e-11
Glyma.02G125700 hypothetical protein NA 1Chr02:12589185–12591860 (-)6.141e-13
Glyma.02G126300 hypothetical protein NA 1Chr02:12670653–12677305 (+)2.801e-11
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)2.801e-11
Glyma.02G126800 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein__AT3G25540:LAG1:TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain co… 1Chr02:12771578–12777488 (+)2.801e-11
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 1Chr02:12849745–12869066 (+)2.801e-11
Glyma.02G127600 hypothetical protein NA 1Chr02:12976382–12983547 (+)2.801e-11
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 1Chr02:15586732–15588774 (+)9.666e-13
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)1.979e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)9.899e-11
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)6e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)5.078e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)4.349e-11
Glyma.04G190900 hypothetical protein AT5G63160:BT1:BTB and TAZ domain protein 1__AT3G48360:BT2:BTB and TAZ domain protein 2 1Chr04:46152356–46155245 (-)4.524e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.595e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.552e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.082e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.777e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.802e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.307e-12
Glyma.06G145200 hypothetical protein AT2G40460:AT2G40460:Major facilitator superfamily protein 1Chr06:11831210–11841320 (+)1.499e-12
Glyma.06G145300 hypothetical protein AT5G05340:PRX52:Peroxidase superfamily protein 1Chr06:11849535–11851671 (+)7.54e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)3.091e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)9.703e-11
Glyma.08G116400 hypothetical protein NA 1Chr08:8947598–8949573 (-)1.638e-11
Glyma.08G116700 hypothetical protein NA 1Chr08:8997512–9003565 (+)7.146e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)9.999e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.937e-12
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)5.922e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.063e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.147e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.147e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.147e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.147e-13
Glyma.08G318800 hypothetical protein AT3G27340:AT3G27340:Myb domain protein 1Chr08:43810829–43812861 (+)7.895e-11
Glyma.09G007900 hypothetical protein NA 1Chr09:605201–611829 (-)8.615e-11
Glyma.09G011600 hypothetical protein NA 1Chr09:891635–893300 (+)9.797e-11
Glyma.09G011700 hypothetical protein NA 1Chr09:894858–897607 (-)4.129e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.266e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.15e-12
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.344e-14
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)5.293e-13
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.459e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.481e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.744e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.55e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.152e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)8.406e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)8.282e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)8.282e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)8.282e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)8.282e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)5.66e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)5.66e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)5.66e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.141e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.141e-12
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)5.154e-14
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)9.209e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.05e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.317e-15
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.318e-15
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.809e-14
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)4.712e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)6.271e-11
Glyma.14G191000 hypothetical protein AT2G29590:AT2G29590:Thioesterase superfamily protein 1Chr14:45577040–45578743 (-)1.435e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.849e-17
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.095e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.849e-17
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.849e-17
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.915e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.058e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.264e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.929e-12
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)6.755e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)5.272e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.688e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)5.35e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.331e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.331e-11
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)7.287e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)6.619e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)7.557e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)7.557e-11
Glyma.18G212700 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr18:49942123–49944169 (-)7.236e-12
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)5.828e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.448e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.448e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)3.133e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.102e-12
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)9.669e-11