SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G125700

Description hypothetical protein

Gene interval Chr02:12589185–12591860 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features87Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

87 matching features · page 8 of 9

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P50412 N(6)-(Octanoyl)lysine 272.2113 12.285e-11
P50455 Carrageenan, potassium salt of 347.2545 12.451e-11
P50631 3'-N-Acetyl-4'-O-(14-methylheptadecanoyl)fusarochromanone 600.4128 19.116e-12
P50681 (-)-Echitoveniline 548.2492 13.037e-12
P51180 Normethandrolone 288.2071 11.613e-11
P51196 Agrimol F 640.2506 12.36e-11
P52684 3-(Allyloxy)estra-1,3,5(10)-triene-16beta,17beta-diol 328.2019 15.709e-11
P52806 Matteuorienate C 588.1799 14.371e-13
P53000 17beta-Hydroxy-7alpha-methylandrost-4-en-3-one 302.2209 17.717e-12
P53031 3-Methoxyestra-1,3,5(10),16-tetraene 268.1810 13.016e-12