SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G107400

Description hypothetical protein

Gene interval Chr02:10245905–10246706 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features157Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

157 matching features · page 6 of 16

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17329 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0982 11.533e-11
P17530 4-({4-[(2,4,6-Trimethylphenyl)amino]-1,3,5-triazin-2-yl}amino)benzonitrile 330.1624 16.167e-11
P17649 Potassium glycerophosphate 200.0459 12.59e-11
P17759 Bismurrangatin 534.1816 12.128e-11
P18005 Lysylserine 233.1390 18.731e-11
P18249 No candidate annotation 842.2163 11.158e-12
P18832 No candidate annotation 151.1060 11.57e-11
P19004 5-Hydroxyketamine 253.0879 15.484e-11
P19149 No candidate annotation 727.2021 11.672e-12
P19474 Tamoxifen-N-glucuronide 547.2576 11.292e-11