Overview Annotation GWAS Evidence Associated genes

P17759

Metabolite ID
P17759
Deionized mass
534.1816 Da
Average m/z
535.1898
Average RT
12.6152
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
35
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

35 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)3.113e-13
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)3.449e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.352e-11
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 2Chr18:48258271–48266554 (-)4.138e-14
Glyma.01G039400 hypothetical protein AT1G10417:AT1G10417:RUN/FYVE domain protein 1Chr01:4270598–4275060 (+)9.578e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.558e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.558e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.04e-12
Glyma.02G107400 hypothetical protein NA 1Chr02:10245905–10246706 (-)2.128e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)1.545e-11
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 1Chr03:758088–760465 (-)1.037e-11
Glyma.03G007900 hypothetical protein NA 1Chr03:764330–766878 (-)6.291e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.282e-11
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)1.693e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.017e-11
Glyma.04G158400 hypothetical protein AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein 1Chr04:38560905–38571145 (-)3.886e-11
Glyma.04G160700 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 1Chr04:39818871–39825716 (+)3.886e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)2.306e-11
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)8.201e-12
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)2.889e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)3.722e-14
Glyma.09G075600 hypothetical protein AT1G34630:AT1G34630:uncharacterized protein 1Chr09:8255346–8260648 (-)7.439e-11
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 1Chr09:8708840–8718819 (-)7.439e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.856e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.844e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)9.394e-15
Glyma.12G049500 hypothetical protein AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein 1Chr12:3547790–3551313 (+)7.085e-11
Glyma.12G050200 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr12:3600553–3604637 (-)7.085e-11
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)8.849e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.646e-14
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.018e-11
Glyma.16G051900 hypothetical protein NA 1Chr16:5009359–5009660 (+)3.095e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.46e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)7.393e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)3.449e-11