SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G086500

Description hypothetical protein

Gene interval Chr02:7532871–7538307 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G14750:SDS:Cyclin family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features8Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

8 matching features · page 1 of 1

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03760 1-Deoxy-1-(N6-lysino)-D-fructose 308.1576 12.159e-11
P04975 (E)-Methyl-4-hydroxycinnamate 178.0625 13.015e-12
P06447 4-Nitrobenzoate 167.0216 16.078e-15
P12292 No candidate annotation 1059.4493 11.863e-16
P12663 (1-{3-[6-(9,9-Difluoro-7-{2-[5-(2-methoxycarbonylamino-3-methyl-butyryl)-5-aza-spiro[2.4]hept-6-yl]-3H-imidazol-4-yl}-9H-fluoren-2-yl)-1H-benzoimidazol-2-yl]-2-aza-bicyclo[2.2.1]heptane-2-carbonyl}-2-methyl-propyl)-carbamic acid methyl ester 888.3986 13.744e-13
P27074 2-(Methylenebutyl)-cyclopropane 110.1094 11.005e-14
P43938 DG(8:0/0:0/22:6(5Z,8E,10Z,13Z,15E,19Z)-2OH(7S, 17S)) 560.3686 17.914e-11
P43940 Beesioside J 722.4216 13.174e-13