Overview Annotation GWAS Evidence Associated genes

P12292

Metabolite ID
P12292
Deionized mass
1059.4493 Da
Average m/z
530.7309
Average RT
11.0524
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G086500 hypothetical protein AT1G14750:SDS:Cyclin family protein 1Chr02:7532871–7538307 (+)1.863e-16
Glyma.04G121700 hypothetical protein NA 1Chr04:15326290–15328370 (-)2.902e-13
Glyma.05G203100 hypothetical protein AT5G63550:AT5G63550:DEK domain-containing chromatin associated protein 1Chr05:38681499–38689289 (-)6.795e-12
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)1.158e-11
Glyma.06G283800 hypothetical protein AT2G31110:AT2G31110:trichome birefringence-like protein (DUF828)__AT2G42570:TBL39:TRICHOME BIREFRINGENCE-LIKE 39 1Chr06:47191044–47195889 (+)1.741e-11
Glyma.06G283900 hypothetical protein NA 1Chr06:47201931–47206514 (+)1.741e-11