SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G173900

Description hypothetical protein

Gene interval Chr01:51092004–51094319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features320Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0125.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

320 matching features · page 14 of 32

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17340 Sibutramine 279.1747 18.112e-11
P17718 No candidate annotation 751.2336 11.006e-11
P18024 Cryptospirolepine 504.1919 12.43e-11
P18034 No candidate annotation 276.1936 18.389e-11
P18126 4-Methoxy-1-naphthaldehyde 186.0686 13.332e-11
P18481 Eugenetin 220.0742 16.061e-11
P18597 LysoPA(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0) 482.2431 15.755e-11
P18799 No candidate annotation 731.2215 15.664e-12
P19069 No candidate annotation 353.5640 15.825e-12
P19093 6-Methoxycrinamine 331.1463 11.026e-11