SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G169700

Description hypothetical protein

Gene interval Chr01:50715084–50719427 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36410:UBC17:ubiquitin-conjugating enzyme 17

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3091Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3091 matching features · page 185 of 310

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30603 (1S,3R,4R,5R)-1-[[(1R,2S)-2-(4-Chlorophenyl)cyclopropyl]methoxy]-3,4-dihydroxy-5-[(Z)-3-imidazo[4,5-b]pyridin-1-yl-3-phenylprop-2-enoyl]oxycyclohexane-1-carboxylic acid 603.1691 12.84e-12
P30623 No candidate annotation 665.7881 12.878e-13
P30643 Tetralin 132.0926 16.127e-15
P30646 No candidate annotation 213.1687 18.989e-13
P30655 Nodulisporic acid D 583.3644 12.205e-15
P30666 (1S-Endo)-5-(4-Chloro-3-methylphenyl)-1-((4-methylphenyl)methyl)-N-(1,3,3-trimethylbicyclo(2.2.1)hept-2-yl)-1H-pyrazole-3-carboxamide 475.2387 18.798e-12
P30672 TRIPHENYLPHOSPHINE 262.0927 13.31e-12
P30687 No candidate annotation 623.7960 19.804e-15
P30716 Mizolastine 432.2103 16.39e-13
P30726 Styrene 104.0616 12.929e-12