SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G045600

Description hypothetical protein

Gene interval Chr01:5242432–5245038 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features669Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records560

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4738.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

669 matching features · page 67 of 67

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P44965 No candidate annotation 121.0953 15.811e-12
P45212 Prucalopride 367.1677 11.613e-11
P46542 Isopongaflavone 334.1231 19.766e-11
P47411 No candidate annotation 548.7589 14.375e-11
P47465 Ancistrotectorine 421.2245 13.314e-11
P47575 Methyl (2E)-2-(10,13-dimethyl-11-oxo-3-pyrrolidin-1-yl-2,7,8,9,12,14,15,16-octahydro-1H-cyclopenta[a]phenanthren-17-ylidene)acetate 409.2651 19.963e-13
P48467 13-Apo-beta-carotenone 258.1964 12.958e-11
P49013 2-Oxo-8-methylthiooctanoic acid 204.0809 16.272e-11
P50482 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0987 19.366e-11