Overview Annotation GWAS Evidence Associated genes

P47575

Metabolite ID
P47575
Deionized mass
409.2651 Da
Average m/z
410.2740
Average RT
24.8378
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 1Chr01:5242432–5245038 (-)9.963e-13
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)8.6e-15
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)9.015e-13
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)9.015e-13
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)3.81e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)9.761e-11
Glyma.05G217100 hypothetical protein AT1G64440:RHD1:NAD(P)-binding Rossmann-fold superfamily protein 1Chr05:39735139–39739763 (+)5.65e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.209e-12
Glyma.07G007100 hypothetical protein NA 1Chr07:529398–533680 (+)2.025e-11
Glyma.07G007300 hypothetical protein NA 1Chr07:541990–545244 (-)8.11e-11
Glyma.07G007400 hypothetical protein AT1G54270:EIF4A-2:eif4a-2__AT3G13920:EIF4A1:eukaryotic translation initiation factor 4A1__AT1G72730:AT1G72730:DEA(D/H)-… 1Chr07:549904–553210 (+)2.025e-11
Glyma.08G366200 hypothetical protein AT2G43370:AT2G43370:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr08:47711879–47716127 (-)2.819e-11
Glyma.09G133800 hypothetical protein NA 1Chr09:33268295–33269240 (+)4.815e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)8.244e-11
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)9.325e-11
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)2.78e-12
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)1.248e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.795e-11
Glyma.16G020900 hypothetical protein NA 1Chr16:1932165–1935289 (-)1.169e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.295e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.295e-13
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.08e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.998e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)7.506e-11