SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G045600

Description hypothetical protein

Gene interval Chr01:5242432–5245038 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features669Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records560

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4738.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

669 matching features · page 3 of 67

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03525 (2R,3R,4S,5S,6R)-2-[(2R,3R,4R,5R)-3-Chloro-2-[dichloro(hydroxy)methyl]-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol 443.9963 32.111e-12
P03834 No candidate annotation 120.0280 32.91e-11
P03908 No candidate annotation 438.5879 32.023e-11
P03958 Asperpyrone A 572.1410 33.545e-12
P04030 Aurantiomide B 358.1659 32.532e-13
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 32.429e-12
P04174 Mesifurane 142.0615 33.904e-11
P04320 6-Methoxykaempferol 3-rhamnoside-7-(4'''-acetylrhamnoside) 650.1799 32.408e-11
P04344 Sulfameter 280.0659 32.311e-11
P04560 17-dimethylarsinoyl-9Z-heptadecenoic acid 388.1968 38.068e-14