SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G045600

Description hypothetical protein

Gene interval Chr01:5242432–5245038 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features669Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records560

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4738.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

669 matching features · page 17 of 67

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17866 No candidate annotation 588.0529 31.695e-13
P17875 Val-Val-Val 315.2141 37.257e-18
P17883 No candidate annotation 587.8008 33.038e-15
P18017 2H-Pyran-2-one 96.0205 39.504e-13
P18034 No candidate annotation 276.1936 32.169e-12
P18122 4'-Chlorodiazepam 318.0334 31.544e-13
P18146 No candidate annotation 602.7943 33.56e-15
P18499 tyrosine-tyrosinate 344.1377 31.199e-12
P18542 (1R,6R)-6-Hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate 240.0621 34.355e-14
P18582 6-Desethyl-OA-6129 A 429.1594 32.887e-14