P17866
Metabolite ID
P17866
Deionized mass
588.0529 Da
Average m/z
589.0601
Average RT
12.6461
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
85
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
85 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.01G045600 | hypothetical protein | NA | 3 | Chr01:5242432–5245038 (-) | 1.695e-13 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 5.8e-12 | |
| Glyma.09G274700 | hypothetical protein | NA | 2 | Chr09:49057465–49065986 (-) | 3.686e-13 | |
| Glyma.09G275800 | hypothetical protein | NA | 2 | Chr09:49116424–49122191 (-) | 3.686e-13 | |
| Glyma.09G276100 | hypothetical protein | AT2G38510:AT2G38510:MATE efflux family protein | 2 | Chr09:49139110–49143810 (-) | 3.686e-13 | |
| Glyma.09G277300 | hypothetical protein | NA | 2 | Chr09:49271634–49276648 (-) | 3.772e-11 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 2 | Chr09:49863377–49871270 (+) | 1.362e-15 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 2.993e-15 | |
| Glyma.01G045400 | hypothetical protein | NA | 1 | Chr01:5140834–5144197 (-) | 3.076e-11 | |
| Glyma.01G045700 | hypothetical protein | AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… | 1 | Chr01:5265956–5271379 (-) | 1.11e-11 | |
| Glyma.01G046600 | hypothetical protein | AT1G14280:PKS2:phytochrome kinase substrate 2 | 1 | Chr01:5379316–5382027 (-) | 2.47e-14 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 6.092e-13 | |
| Glyma.01G234100 | hypothetical protein | AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr01:56022128–56026001 (+) | 4.186e-11 | |
| Glyma.01G235200 | hypothetical protein | AT1G05460:SDE3:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr01:56103784–56110667 (-) | 2.739e-11 | |
| Glyma.02G293100 | hypothetical protein | AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein | 1 | Chr02:47183443–47188007 (-) | 4.929e-14 | |
| Glyma.02G294000 | hypothetical protein | NA | 1 | Chr02:47237993–47240495 (+) | 7.434e-12 | |
| Glyma.02G294200 | hypothetical protein | AT3G20290:EHD1:EPS15 homology domain 1 | 1 | Chr02:47256480–47263517 (+) | 1.354e-13 | |
| Glyma.02G294500 | hypothetical protein | AT5G50850:MAB1:Transketolase family protein | 1 | Chr02:47272683–47277831 (-) | 1.53e-12 | |
| Glyma.02G294900 | hypothetical protein | AT5G55220:AT5G55220:trigger factor type chaperone family protein | 1 | Chr02:47300149–47306133 (+) | 6.095e-15 | |
| Glyma.02G295000 | hypothetical protein | AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein | 1 | Chr02:47306160–47312036 (-) | 6.095e-15 | |
| Glyma.02G295900 | hypothetical protein | NA | 1 | Chr02:47375932–47378006 (+) | 2.161e-13 | |
| Glyma.02G296200 | hypothetical protein | AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 | 1 | Chr02:47383044–47395946 (-) | 2.161e-13 | |
| Glyma.02G296300 | hypothetical protein | AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein | 1 | Chr02:47399263–47406220 (-) | 4.746e-14 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 8.97e-12 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 2.281e-11 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 1.697e-11 | |
| Glyma.04G084600 | hypothetical protein | NA | 1 | Chr04:7171949–7173688 (+) | 6.799e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 6.238e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 6.687e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 6.687e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 6.687e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.934e-11 | |
| Glyma.06G303700 | hypothetical protein | AT1G05230:HDG2:homeodomain GLABROUS 2 | 1 | Chr06:49315918–49324382 (+) | 8.508e-11 | |
| Glyma.06G304200 | hypothetical protein | AT1G04910:AT1G04910:O-fucosyltransferase family protein | 1 | Chr06:49352555–49358511 (-) | 2.714e-11 | |
| Glyma.07G095400 | hypothetical protein | NA | 1 | Chr07:8914725–8920132 (+) | 2.784e-11 | |
| Glyma.08G122200 | hypothetical protein | NA | 1 | Chr08:9416766–9429995 (-) | 5.8e-12 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 5.8e-12 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 5.8e-12 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 5.8e-12 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 1.254e-12 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 1.326e-14 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 9.35e-16 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 2.497e-14 | |
| Glyma.09G238200 | NIP2-1 | putative Si transporter NIP2-1 | NA | 1 | Chr09:46029192–46034136 (+) | 5.94e-12 |
| Glyma.09G270400 | hypothetical protein | NA | 1 | Chr09:48735991–48740879 (+) | 9.262e-13 | |
| Glyma.09G274900 | hypothetical protein | AT5G02280:AT5G02280:SNARE-like superfamily protein | 1 | Chr09:49069946–49073277 (-) | 3.686e-13 | |
| Glyma.09G275100 | hypothetical protein | AT3G08760:ATSIK:Protein kinase superfamily protein | 1 | Chr09:49079101–49084269 (-) | 3.686e-13 | |
| Glyma.09G275300 | hypothetical protein | NA | 1 | Chr09:49094668–49096996 (-) | 3.686e-13 | |
| Glyma.09G275900 | hypothetical protein | AT5G01850:AT5G01850:Protein kinase superfamily protein | 1 | Chr09:49128687–49133154 (-) | 3.686e-13 | |
| Glyma.09G276000 | hypothetical protein | NA | 1 | Chr09:49131662–49132187 (+) | 3.686e-13 | |
| Glyma.09G276300 | WNK10 | AT3G51630:WNK5:with no lysine (K) kinase 5 | 1 | Chr09:49161113–49166087 (+) | 3.141e-12 | |
| Glyma.11G024800 | hypothetical protein | NA | 1 | Chr11:1754343–1759398 (+) | 7.573e-12 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 1.458e-12 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 9.683e-11 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 9.683e-11 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 9.683e-11 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 9.683e-11 | |
| Glyma.11G065000 | hypothetical protein | AT4G36730:GBF1:G-box binding factor 1 | 1 | Chr11:4916855–4922192 (+) | 1.397e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 9.083e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 9.083e-11 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 9.426e-14 | |
| Glyma.12G193800 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 1 | Chr12:35551596–35559129 (+) | 3.193e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 3.312e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 3.312e-11 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 1.687e-12 | |
| Glyma.14G094200 | hypothetical protein | AT5G11840:AT5G11840:YCF36, putative (DUF1230) | 1 | Chr14:8770378–8774149 (-) | 1.494e-13 | |
| Glyma.14G094300 | hypothetical protein | NA | 1 | Chr14:8771316–8772515 (+) | 1.494e-13 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 2.784e-15 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 5.585e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 5.585e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 5.585e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 2.717e-13 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.929e-13 | |
| Glyma.15G257100 | hypothetical protein | AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein | 1 | Chr15:48661607–48665946 (-) | 4.486e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 1.634e-12 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 1.634e-12 | |
| Glyma.17G121800 | hypothetical protein | AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 | 1 | Chr17:9746590–9748712 (+) | 3.612e-15 | |
| Glyma.17G135100 | hypothetical protein | AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) | 1 | Chr17:10870710–10872285 (+) | 1.629e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 4.468e-13 | |
| Glyma.18G021700 | hypothetical protein | NA | 1 | Chr18:1590986–1596262 (-) | 7.811e-14 | |
| Glyma.18G027300 | hypothetical protein | NA | 1 | Chr18:2049280–2053959 (-) | 1.012e-11 | |
| Glyma.18G201700 | hypothetical protein | NA | 1 | Chr18:48175554–48180264 (+) | 8.549e-11 | |
| Glyma.19G119100 | hypothetical protein | AT3G03650:EDA5:Exostosin family protein | 1 | Chr19:37668759–37672434 (+) | 2.332e-11 | |
| Glyma.19G150000 | hypothetical protein | AT3G58060:AT3G58060:Cation efflux family protein | 1 | Chr19:41018746–41025024 (+) | 1.581e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 1.203e-12 |