SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G030500

Description hypothetical protein

Gene interval Chr01:3189212–3200277 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features68Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records2

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0294.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

68 matching features · page 5 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28434 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1834 18.121e-12
P29694 Huperzine D 286.1663 18.62e-11
P30042 No candidate annotation 939.4715 19.184e-11
P32140 N-(4-(2-Chlorophenyl)-6,7-dimethyl-3-quinolyl)-N'-(2,4-difluorophenyl)urea 437.1082 15.557e-11
P32904 No candidate annotation 843.3302 17.844e-11
P37333 Xanthobaccin C 494.2826 11.35e-11
P37634 Gualamycin 590.2188 16.535e-12
P38174 Azaspiracid 13 859.4835 15.893e-11
P40835 Gnidicin-20-palmitate 866.4613 15.356e-11
P41025 CDP-DG(i-15:0/20:4(5Z,8Z,11Z,13E)+=O(15)) 1001.4851 19.482e-11