Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P29694

Metabolite ID
P29694
Deionized mass
286.1663 Da
Average m/z
287.1755
Average RT
15.8466
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.253e-12
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)4.717e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)9.469e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)8.57e-14
Glyma.01G014800 hypothetical protein NA 1Chr01:1459585–1464612 (+)1.901e-12
Glyma.01G030500 hypothetical protein NA 1Chr01:3189212–3200277 (+)8.62e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)3.43e-12
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)3.43e-12
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)3.43e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.371e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.348e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.568e-17
Glyma.10G156300 hypothetical protein AT3G05210:ERCC1:nucleotide repair protein 1Chr10:39053531–39057116 (-)8.271e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)2.83e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.676e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.676e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.179e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.179e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.115e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.502e-14
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.57e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.871e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.253e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.212e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.111e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)5.436e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.241e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.241e-12
Glyma.16G212800 hypothetical protein NA 1Chr16:37095210–37103646 (+)1.13e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)6.176e-12
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)2.324e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)6.786e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)5.565e-11
Glyma.19G188800 hypothetical protein AT1G03910:AT1G03910:cactus-binding carboxy-terminal, cactin 1Chr19:44684130–44690198 (+)3.442e-12
Glyma.19G189300 hypothetical protein AT5G03795:AT5G03795:Exostosin family protein 1Chr19:44728329–44733295 (+)1.671e-11
Glyma.19G189600 hypothetical protein AT2G36620:RPL24A:ribosomal protein L24 1Chr19:44744021–44746094 (+)1.705e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)2.114e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.942e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)5.452e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.705e-15
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)5.657e-11