SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G010200

Description hypothetical protein

Gene interval Chr01:993024–997480 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G32060:PRK:phosphoribulokinase

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features161Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records7

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0435.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

161 matching features · page 4 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08154 Cyanidin 3-(6''-malonylglucoside) 534.0981 13.497e-12
P08169 No candidate annotation 943.2957 12.078e-11
P08223 N-Acetylmuramic acid alpha-1-phosphate 373.0770 14.926e-11
P08740 Sulfisomidine 278.0837 12.484e-11
P08885 (5R,6S)-5,6-Epoxy-7-megastigmen-9-one 208.1431 18.481e-12
P08977 No candidate annotation 485.0741 14.003e-13
P09548 Taurolidine 284.0632 17.79e-11
P11049 No candidate annotation 766.1077 11.168e-11
P11080 Grapiprant 491.2006 19.335e-11
P11442 Bunazosin 373.2181 15.808e-11