SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G010200

Description hypothetical protein

Gene interval Chr01:993024–997480 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G32060:PRK:phosphoribulokinase

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features161Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records7

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0435.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

161 matching features · page 14 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41067 No candidate annotation 431.2096 11.319e-11
P41535 H-Gly-Arg-Gly-Asp-D-Ser-Pro-OH 587.2692 13.369e-11
P41635 CDP-DG(22:6(4Z,7Z,10Z,12E,16Z,19Z)-OH(14)/i-19:0) 1083.5609 11.858e-11
P41898 No candidate annotation 546.7256 17.885e-13
P41997 Bisglaucumlide B 738.4374 18.477e-12
P42141 TG(22:0/20:0/a-25:0)[rac] 1073.0212 12.383e-11
P42226 No candidate annotation 365.2224 18.302e-11
P42545 Zipeprol 384.2409 13.167e-13
P43166 1-heptadecanoyl-glycero-3-phosphate 424.2593 15.029e-11
P43199 Adouetine Z 699.3475 11.31e-11