Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P55561

Metabolite ID
P55561
Deionized mass
364.1720 Da
Average m/z
365.1808
Average RT
31.9469
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)1.206e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)7.255e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.246e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.246e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.736e-14
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.631e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)4.566e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)6.8e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.628e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.603e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.008e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.114e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.896e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.258e-14
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.611e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)5.943e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)6.407e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.127e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)1.127e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)5.282e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.503e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.503e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.246e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)3.122e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.728e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)9.405e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.537e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.234e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.537e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.537e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.907e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.939e-11
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.655e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.598e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.598e-11
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)9.651e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)8.429e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)4.872e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.872e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)5.628e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.818e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.818e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.385e-11