Soybean mGWAS DB

Overview Annotation GWAS Evidence Associated genes

P53404

Metabolite ID
P53404
Deionized mass
242.0429807
Average m/z
243.0519758
Average RT
29.99427865
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
186
GWAS result file
Available

External annotation search

GWAS Evidence

Now loading Manhattan Plot...
Now loading QQ Plot...
Now loading Summary Statistics...

Associated genes

Gene ID Alias Description Arabidopsis ortholog Supporting loci
Glyma.16G209300 hypothetical protein NA 4
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3
Glyma.06G201700 hypothetical protein NA 3
Glyma.16G196900 hypothetical protein NA 3
Glyma.16G210200 hypothetical protein NA 3
Glyma.17G218600 hypothetical protein NA 3
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2
Glyma.09G057000 hypothetical protein NA 2
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2
Glyma.13G135700 hypothetical protein NA 2
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 2
Glyma.14G093100 hypothetical protein NA 2
Glyma.14G149300 hypothetical protein NA 2
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2
Glyma.16G178800 hypothetical protein NA 2
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2
Glyma.01G099100 hypothetical protein NA 1
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1
Glyma.01G099900 hypothetical protein NA 1
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1
Glyma.01G170700 hypothetical protein NA 1
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 1
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1
Glyma.02G107400 hypothetical protein NA 1
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1
Glyma.02G205300 hypothetical protein NA 1
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1
Glyma.03G136000 hypothetical protein NA 1
Glyma.03G209700 hypothetical protein NA 1
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1
Glyma.05G124700 hypothetical protein NA 1
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1
Glyma.05G127500 hypothetical protein NA 1
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1
Glyma.05G164700 hypothetical protein NA 1
Glyma.05G224700 hypothetical protein NA 1
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1
Glyma.06G200200 hypothetical protein NA 1
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1
Glyma.06G291800 hypothetical protein NA 1
Glyma.06G292000 hypothetical protein NA 1
Glyma.06G292100 hypothetical protein NA 1
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1
Glyma.07G017600 hypothetical protein NA 1
Glyma.07G021100 hypothetical protein NA 1
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1
Glyma.07G021700 hypothetical protein NA 1
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1
Glyma.07G068600 hypothetical protein NA 1
Glyma.07G069100 hypothetical protein NA 1
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1
Glyma.08G330400 hypothetical protein NA 1
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1
Glyma.09G016500 hypothetical protein NA 1
Glyma.09G016800 hypothetical protein NA 1
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1
Glyma.09G056900 hypothetical protein NA 1
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1
Glyma.09G080200 hypothetical protein NA 1
Glyma.09G082000 hypothetical protein NA 1
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1
Glyma.10G081700 hypothetical protein NA 1
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1
Glyma.11G049700 hypothetical protein NA 1
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1
Glyma.11G050600 hypothetical protein NA 1
Glyma.11G051600 hypothetical protein NA 1
Glyma.11G061800 hypothetical protein NA 1
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1
Glyma.12G007700 hypothetical protein NA 1
Glyma.12G007800 hypothetical protein NA 1
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1
Glyma.12G114900 hypothetical protein NA 1
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1
Glyma.12G202300 hypothetical protein NA 1
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1
Glyma.13G049100 hypothetical protein NA 1
Glyma.13G095000 hypothetical protein NA 1
Glyma.13G134300 hypothetical protein NA 1
Glyma.13G135300 hypothetical protein NA 1
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1
Glyma.14G068500 hypothetical protein NA 1
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1
Glyma.14G201600 hypothetical protein NA 1
Glyma.14G201700 hypothetical protein NA 1
Glyma.14G213400 hypothetical protein NA 1
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1
Glyma.15G124000 hypothetical protein NA 1
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1
Glyma.15G140400 hypothetical protein NA 1
Glyma.15G141100 hypothetical protein NA 1
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1
Glyma.16G025300 hypothetical protein NA 1
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1
Glyma.16G105100 hypothetical protein NA 1
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1
Glyma.16G117400 hypothetical protein NA 1
Glyma.16G119300 hypothetical protein NA 1
Glyma.16G119400 hypothetical protein NA 1
Glyma.16G121500 hypothetical protein NA 1
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1
Glyma.16G178700 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 1
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 1
Glyma.16G179100 BCH2 beta-carotene hydroxylase BCH2 AT4G25700:BETA-OHASE 1:beta-hydroxylase 1__AT5G52570:BETA-OHASE 2:beta-carotene hydroxylase 2 1
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1
Glyma.16G209900 hypothetical protein NA 1
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1
Glyma.17G118900 hypothetical protein NA 1
Glyma.17G214600 hypothetical protein NA 1
Glyma.17G215500 KNAT5 NA 1
Glyma.17G218700 hypothetical protein NA 1
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1
Glyma.18G079100 hypothetical protein NA 1
Glyma.18G112600 hypothetical protein NA 1
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 1
Glyma.19G011600 hypothetical protein NA 1
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1
Glyma.19G012300 hypothetical protein NA 1
Glyma.19G127500 hypothetical protein NA 1
Glyma.19G128200 hypothetical protein NA 1
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1