Overview Annotation GWAS Evidence Associated genes

P53064

Metabolite ID
P53064
Deionized mass
352.8228 Da
Average m/z
353.8296
Average RT
29.5780
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)3.559e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.251e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.452e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.22e-14
Glyma.10G038200 hypothetical protein NA 1Chr10:3394443–3395342 (-)2.417e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.458e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)6.526e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)7.628e-14
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)7.628e-14
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)2.362e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.633e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.633e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.125e-12