Overview Annotation GWAS Evidence Associated genes

P52693

Metabolite ID
P52693
Deionized mass
326.2233 Da
Average m/z
327.2309
Average RT
28.9593
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.107e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.7e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)4.154e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)9.998e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)8.834e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.278e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)2.668e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.099e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.099e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.107e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.116e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.116e-11
Glyma.18G031900 hypothetical protein NA 1Chr18:2471787–2483157 (+)7.752e-12