Overview Annotation GWAS Evidence Associated genes

P52596

Metabolite ID
P52596
Deionized mass
160.9608 Da
Average m/z
161.9682
Average RT
28.7521
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)8.042e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)8.042e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.479e-13
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.825e-11
Glyma.01G034800 hypothetical protein NA 1Chr01:3605528–3607302 (-)1.724e-11
Glyma.19G030100 hypothetical protein NA 1Chr19:3732644–3733945 (+)4.143e-11
Glyma.19G030500 GmAT133 NA 1Chr19:3779017–3781453 (-)4.143e-11
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 1Chr19:3839225–3845784 (-)2.955e-12