Overview Annotation GWAS Evidence Associated genes

P52120

Metabolite ID
P52120
Deionized mass
312.0870 Da
Average m/z
313.0952
Average RT
28.4099
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)1.432e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.554e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.509e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.543e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.543e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.543e-11
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)7.552e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.432e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.266e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.554e-12