Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P51855

Metabolite ID
P51855
Deionized mass
195.9643 Da
Average m/z
196.9712
Average RT
28.1383
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
103
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

103 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)9.735e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.076e-11
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)7.239e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.06e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)6.734e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)6.133e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.065e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)5.665e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.107e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.107e-13
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 2Chr13:31720004–31725252 (+)2.626e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.392e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.568e-11
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)3.393e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.466e-13
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)2.218e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.821e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.707e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.076e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.627e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)6.848e-12
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)7.239e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)1.57e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.289e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8e-15
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)1.535e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)1.535e-11
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)1.531e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)7.278e-14
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.343e-17
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.261e-14
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)6.498e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.182e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.364e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.364e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.364e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)5.502e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.898e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.912e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.864e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.838e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.758e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.244e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.244e-15
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.578e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.813e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)9.284e-13
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)4.739e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.06e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.06e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.477e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)6.809e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.314e-11
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)3.701e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.964e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.067e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.292e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.145e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)8.909e-12
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)4.999e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)7.767e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)7.767e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.273e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.817e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.589e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)1.589e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.231e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.005e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)8.054e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.3e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.249e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.249e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.518e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.518e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.409e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)5.665e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.862e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.863e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.107e-13
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.734e-11
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)6.733e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)5.369e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.631e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.712e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.568e-11
Glyma.14G191400 hypothetical protein NA 1Chr14:45610980–45612600 (+)1.653e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.35e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)8.754e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.19e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.86e-11
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)8.042e-11
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)6.599e-12
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)6.599e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.744e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)7.071e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)2.499e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.272e-17
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.272e-17
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:34998146–35001862 (+)1.969e-11
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 1Chr19:35024582–35025690 (+)1.969e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.821e-11
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)9.734e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.86e-11