P49916
Metabolite ID
P49916
Deionized mass
409.2673 Da
Average m/z
410.2756
Average RT
26.5229
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
107
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
107 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G209300 | hypothetical protein | NA | 4 | Chr16:36856833–36863994 (-) | 1.104e-12 | |
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 6.836e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 2 | Chr12:36267599–36271584 (+) | 3.069e-17 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 2 | Chr12:36289704–36295084 (-) | 7.533e-15 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 2.919e-14 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 2.762e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 2.762e-14 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 3.045e-12 | |
| Glyma.16G031600 | hypothetical protein | NA | 2 | Chr16:2964569–2985013 (+) | 3.037e-11 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 2 | Chr16:30514629–30519598 (+) | 8.994e-13 | |
| Glyma.16G146700 | hypothetical protein | NA | 2 | Chr16:30755899–30759360 (-) | 4.512e-12 | |
| Glyma.16G196900 | hypothetical protein | NA | 2 | Chr16:35841279–35846894 (-) | 4.836e-11 | |
| Glyma.18G266400 | hypothetical protein | AT3G29390:RIK:RS2-interacting KH protein | 2 | Chr18:55076548–55086297 (+) | 2.073e-11 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1134716–1143232 (+) | 4.55e-12 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 1.676e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 1.676e-12 | |
| Glyma.02G113000 | hypothetical protein | AT1G69370:CM3:chorismate mutase 3 | 1 | Chr02:10939096–10941983 (-) | 5.635e-11 | |
| Glyma.02G138200 | hypothetical protein | NA | 1 | Chr02:14307786–14310106 (-) | 4.132e-11 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 1 | Chr02:38993365–39000790 (+) | 5.552e-11 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 2.771e-11 | |
| Glyma.02G287700 | hypothetical protein | AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … | 1 | Chr02:46797935–46805223 (-) | 5.093e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 7.492e-12 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 4.896e-12 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 5.23e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 7.875e-11 | |
| Glyma.04G235400 | hypothetical protein | AT3G49260:iqd21:IQ-domain 21 | 1 | Chr04:50351726–50356449 (-) | 9.102e-11 | |
| Glyma.05G034000 | hypothetical protein | AT4G03400:DFL2:Auxin-responsive GH3 family protein | 1 | Chr05:2965889–2971412 (-) | 2.054e-12 | |
| Glyma.05G137500 | hypothetical protein | NA | 1 | Chr05:33012282–33015297 (-) | 1.238e-11 | |
| Glyma.05G137600 | hypothetical protein | NA | 1 | Chr05:33018107–33020120 (-) | 3.158e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.979e-12 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 4.687e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.112e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 7.787e-12 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 1.741e-13 | |
| Glyma.06G184100 | hypothetical protein | NA | 1 | Chr06:15897746–15902462 (+) | 7.87e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 6.837e-12 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 6.837e-12 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 1 | Chr06:50586679–50589765 (+) | 4.778e-11 | |
| Glyma.07G075000 | hypothetical protein | AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein | 1 | Chr07:6821674–6829551 (-) | 3.875e-11 | |
| Glyma.07G075300 | hypothetical protein | NA | 1 | Chr07:6843882–6845602 (-) | 3.875e-11 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 4.042e-12 |
| Glyma.08G239500 | hypothetical protein | AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:20444715–20447665 (-) | 5.147e-11 | |
| Glyma.08G338900 | hypothetical protein | NA | 1 | Chr08:45536950–45543029 (-) | 8.635e-11 | |
| Glyma.09G016800 | hypothetical protein | NA | 1 | Chr09:1300913–1311894 (+) | 7.367e-11 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 1.855e-13 | |
| Glyma.09G060200 | hypothetical protein | AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr09:5571201–5579976 (-) | 1.896e-11 | |
| Glyma.09G060300 | hypothetical protein | AT5G57140:PAP28:purple acid phosphatase 28 | 1 | Chr09:5609003–5612943 (+) | 2.413e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 7.814e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.222e-13 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 1.286e-12 | |
| Glyma.09G246700 | hypothetical protein | AT1G22840:CYTC-1:CYTOCHROME C-1 | 1 | Chr09:46835469–46838091 (-) | 4.342e-14 | |
| Glyma.10G238200 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr10:46680865–46684088 (+) | 5.348e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 8.859e-12 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 8.86e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 3.069e-17 | |
| Glyma.12G203300 | hypothetical protein | AT4G03430:EMB2770:pre-mRNA splicing factor-like protein | 1 | Chr12:36371465–36377700 (-) | 3.737e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 9.541e-16 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 5.407e-13 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 5.407e-13 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 6.165e-11 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 8.577e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.298e-13 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.298e-13 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 2.762e-14 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 2.712e-12 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 9.848e-12 | |
| Glyma.14G044100 | hypothetical protein | AT5G62300:AT5G62300:Ribosomal protein S10p/S20e family protein | 1 | Chr14:3347545–3348907 (+) | 2.293e-11 | |
| Glyma.14G075900 | hypothetical protein | NA | 1 | Chr14:6362111–6364010 (-) | 7.267e-11 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 4.115e-12 | |
| Glyma.15G047100 | hypothetical protein | AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) | 1 | Chr15:3736217–3746037 (+) | 9.68e-11 | |
| Glyma.15G047800 | hypothetical protein | AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | 1 | Chr15:3777567–3783739 (+) | 9.68e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 6.069e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 8.869e-13 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 6.069e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 6.069e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.544e-12 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 8.04e-11 | |
| Glyma.16G020200 | hypothetical protein | NA | 1 | Chr16:1828561–1835982 (-) | 7.824e-11 | |
| Glyma.16G025300 | hypothetical protein | NA | 1 | Chr16:2438122–2440528 (-) | 9.03e-11 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 1 | Chr16:2443212–2450834 (-) | 9.03e-11 | |
| Glyma.16G113000 | hypothetical protein | NA | 1 | Chr16:25112070–25116073 (+) | 8.162e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 3.263e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 3.725e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 7.381e-12 | |
| Glyma.16G138400 | hypothetical protein | NA | 1 | Chr16:29560913–29562163 (+) | 5.128e-11 | |
| Glyma.16G144100 | hypothetical protein | NA | 1 | Chr16:30432951–30434052 (-) | 6.275e-13 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 4.615e-15 | |
| Glyma.16G145200 | hypothetical protein | NA | 1 | Chr16:30586018–30588859 (-) | 7.526e-12 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 4.616e-15 | |
| Glyma.16G146300 | hypothetical protein | NA | 1 | Chr16:30714315–30716624 (+) | 4.512e-12 | |
| Glyma.16G147000 | hypothetical protein | NA | 1 | Chr16:30773803–30777822 (-) | 1.517e-13 | |
| Glyma.16G147400 | hypothetical protein | NA | 1 | Chr16:30817535–30821568 (+) | 6.332e-11 | |
| Glyma.16G196200 | HSF-32 | heat stress transcription factor 32 | AT5G62020:HSFB2A:heat shock transcription factor B2A | 1 | Chr16:35760178–35761852 (+) | 9.577e-12 |
| Glyma.16G207900 | hypothetical protein | AT5G08450:AT5G08450:zinc finger CCCH domain protein | 1 | Chr16:36754888–36763450 (+) | 1.948e-11 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 2.767e-12 | |
| Glyma.18G242900 | hypothetical protein | NA | 1 | Chr18:53113341–53119592 (-) | 2.282e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 7.152e-14 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 1.39e-13 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 3.243e-15 | |
| Glyma.18G267500 | hypothetical protein | NA | 1 | Chr18:55179516–55181798 (-) | 8.914e-11 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 2.057e-12 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 2.22e-12 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 2.22e-12 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 1.594e-12 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 7.278e-13 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 8.721e-12 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 2.323e-13 |