Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49911

Metabolite ID
P49911
Deionized mass
96.0195 Da
Average m/z
97.0272
Average RT
26.5205
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G183400 hypothetical protein NA 2Chr13:29666942–29670201 (+)4.791e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.349e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.5e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)8.557e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.369e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.369e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)3.691e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.108e-11
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)3.08e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.94e-15
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)3.846e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.612e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.073e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)1.981e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.361e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.872e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.667e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.834e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.572e-13
Glyma.10G236000 hypothetical protein NA 1Chr10:46499079–46501955 (-)9.938e-11
Glyma.10G236100 hypothetical protein AT5G52280:AT5G52280:Myosin heavy chain-related protein 1Chr10:46503152–46510614 (-)9.938e-11
Glyma.10G236800 hypothetical protein NA 1Chr10:46559759–46563487 (+)9.938e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)6.786e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)8.641e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.007e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.007e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.007e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.007e-11
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)7.047e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.716e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.716e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.09e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.09e-11
Glyma.13G180300 hypothetical protein NA 1Chr13:29378090–29379784 (-)8.528e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)6.375e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.528e-13
Glyma.14G149900 hypothetical protein NA 1Chr14:32305914–32312520 (-)5.677e-11
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 1Chr14:32314092–32316626 (+)3.371e-12
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr14:32471354–32474446 (-)1.47e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.5e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.014e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.612e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.014e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.014e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.665e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.259e-11
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)4.754e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.075e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.978e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.112e-13
Glyma.16G189500 hypothetical protein NA 1Chr16:35202920–35206459 (-)1.089e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.825e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.825e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)2.355e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.74e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)2.392e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.595e-12