Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49651

Metabolite ID
P49651
Deionized mass
372.2429 Da
Average m/z
373.2502
Average RT
26.2607
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)3.264e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)1.163e-12
Glyma.05G191200 hypothetical protein AT5G64070:PI-4KBETA1:phosphatidylinositol 4-OH kinase beta1 2Chr05:37681814–37696898 (+)9.082e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.359e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.977e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.765e-18
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.765e-18
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)6.983e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.801e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.801e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)9.099e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)6.223e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.055e-13
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)9.133e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)4.604e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.604e-11
Glyma.05G191100 hypothetical protein NA 1Chr05:37676422–37680204 (+)9.082e-11
Glyma.05G191400 hypothetical protein AT2G13690:AT2G13690:PRLI-interacting factor 1Chr05:37703526–37706642 (-)9.082e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.895e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.895e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)3.038e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.486e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)4.146e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)8.287e-13
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.46e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)6.14e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.5e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.316e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.316e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.845e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.977e-15
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.57e-13
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)3.371e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.765e-18
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.765e-18
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.844e-18
Glyma.13G136500 hypothetical protein NA 1Chr13:24910198–24916336 (-)5.918e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.677e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.243e-11
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)4.213e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)3.294e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)3.294e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.158e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.264e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.621e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)5.875e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.636e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.636e-16
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.167e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)7.928e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.802e-13