Overview Annotation GWAS Evidence Associated genes

P49424

Metabolite ID
P49424
Deionized mass
564.3811 Da
Average m/z
565.3915
Average RT
26.1406
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.736e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.141e-13
Glyma.06G305300 hypothetical protein NA 2Chr06:49431590–49435985 (-)1.141e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.736e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.989e-14
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)3.876e-15
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.676e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.755e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)7.459e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.339e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.833e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.371e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)3.515e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.141e-13
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)3.82e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.394e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)6.258e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.681e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.681e-11
Glyma.20G013700 hypothetical protein NA 1Chr20:1223277–1224375 (+)6.986e-11