Overview Annotation GWAS Evidence Associated genes

P49330

Metabolite ID
P49330
Deionized mass
406.2644 Da
Average m/z
407.2714
Average RT
26.0188
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 2Chr10:48805999–48811533 (-)7.333e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)4.267e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)8.454e-11
Glyma.03G081100 hypothetical protein NA 1Chr03:21841282–21846130 (+)8.49e-14
Glyma.03G085900 hypothetical protein AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760) 1Chr03:25280967–25285887 (-)1.092e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)3.748e-14
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 1Chr18:55672621–55681964 (+)8.2e-11