Overview Annotation GWAS Evidence Associated genes

P49256

Metabolite ID
P49256
Deionized mass
284.1627 Da
Average m/z
285.1692
Average RT
25.9727
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.476e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.876e-14
Glyma.12G059300 hypothetical protein NA 2Chr12:4289989–4292215 (-)1.783e-12
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)7.067e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.905e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)1.989e-11
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)6.539e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)7.261e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.814e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.476e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.476e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.476e-11
Glyma.18G079100 hypothetical protein NA 1Chr18:7600652–7603424 (-)7.742e-14
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)3.454e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.04e-12
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)1.045e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)5.586e-11