Overview Annotation GWAS Evidence Associated genes

P48463

Metabolite ID
P48463
Deionized mass
467.2796 Da
Average m/z
468.2876
Average RT
25.3289
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G060000 hypothetical protein NA 2Chr09:5548206–5554279 (-)8.512e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 2Chr09:5571201–5579976 (-)6.449e-13
Glyma.20G009700 hypothetical protein AT2G15820:OTP51:endonuclease 2Chr20:847971–851447 (+)8.37e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.575e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.351e-12
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 1Chr09:5504630–5507434 (+)6.449e-13
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 1Chr09:5513108–5520158 (+)6.449e-13
Glyma.09G060100 hypothetical protein AT5G57160:ATLIG4:DNA ligase IV 1Chr09:5561072–5570789 (+)8.512e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.383e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.383e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.383e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.383e-11
Glyma.10G213900 hypothetical protein AT2G35820:AT2G35820:ureidoglycolate hydrolase__AT2G35810:AT2G35810:ureidoglycolate hydrolase 1Chr10:44627193–44629900 (+)2.76e-12
Glyma.10G214200 hypothetical protein NA 1Chr10:44640345–44645298 (+)2.76e-12
Glyma.10G214700 hypothetical protein AT1G72000:A/N-InvF:Plant neutral invertase family protein__AT1G22650:A/N-InvD:Plant neutral invertase family protein__A… 1Chr10:44674211–44679550 (-)1.985e-14