Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P48418

Metabolite ID
P48418
Deionized mass
366.2701 Da
Average m/z
367.2783
Average RT
25.3027
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)8.532e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)1.509e-11
Glyma.10G079800 hypothetical protein NA 2Chr10:9223520–9228511 (-)1.948e-11
Glyma.10G081200 hypothetical protein NA 2Chr10:9600771–9603988 (-)7.517e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)7.639e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.732e-17
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.732e-17
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)9.122e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.094e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.801e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.56e-13
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)1.088e-13
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.651e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.657e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.222e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.724e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)8.532e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)8.532e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.377e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.137e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.872e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.991e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.493e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.874e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.948e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.948e-11
Glyma.10G079900 hypothetical protein AT3G11650:NHL2:NDR1/HIN1-like 2 1Chr10:9245085–9246282 (-)4.348e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.948e-11
Glyma.10G080100 hypothetical protein AT2G44860:AT2G44860:Ribosomal protein L24e family protein 1Chr10:9295934–9296863 (-)4.348e-11
Glyma.10G080200 hypothetical protein NA 1Chr10:9350912–9352018 (+)4.348e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)4.152e-14
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)4.152e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.743e-12
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)4.091e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.683e-14
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.639e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.673e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.673e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.732e-17
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.191e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)3.266e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.576e-15
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)9.561e-13
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)9.561e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.1e-12
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)2.473e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.335e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)2.647e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.503e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.366e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.366e-12