Overview Annotation GWAS Evidence Associated genes

P48283

Metabolite ID
P48283
Deionized mass
334.1303 Da
Average m/z
335.1368
Average RT
25.1539
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.723e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.723e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.905e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.116e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.973e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.286e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.286e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.675e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.015e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.015e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.015e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.556e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.358e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.561e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.318e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.768e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.768e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.768e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.768e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.866e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.546e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)3.352e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.5e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)5.926e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)5.43e-11