Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P48091

Metabolite ID
P48091
Deionized mass
208.1423 Da
Average m/z
209.1504
Average RT
25.0815
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)2.998e-11
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 2Chr06:19693187–19711341 (-)9.853e-11
Glyma.06G207100 hypothetical protein AT1G73990:SPPA:signal peptide peptidase 2Chr06:19963095–19969940 (-)5.887e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.757e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.757e-11
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)7.531e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.28e-11
Glyma.20G114400 hypothetical protein AT1G68585:AT1G68585:uncharacterized protein 2Chr20:35614355–35616709 (-)4.774e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.061e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.367e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.053e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.764e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.764e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.764e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.764e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.764e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.764e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.764e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)3.01e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)5.988e-11
Glyma.05G219800 TRE1 trehalase 1 AT4G24040:TRE1:trehalase 1 1Chr05:39920183–39925215 (+)3.339e-13
Glyma.05G220100 hypothetical protein AT1G33170:AT1G33170:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:39950499–39956022 (+)3.339e-13
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)7.468e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.223e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.505e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.233e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.233e-14
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 1Chr06:19583729–19590906 (+)9.854e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.309e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.589e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.309e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.309e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.589e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)8.141e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)6.062e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.969e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.969e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)7.34e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.66e-14
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)3.918e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.918e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.757e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.757e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)6.749e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.757e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.051e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)3.991e-12
Glyma.11G165900 hypothetical protein AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein 1Chr11:15890687–15912099 (-)3.598e-11
Glyma.11G166100 hypothetical protein AT2G30110:UBA1:ubiquitin-activating enzyme 1 1Chr11:15941545–15948932 (+)3.598e-11
Glyma.11G166200 hypothetical protein NA 1Chr11:15951003–15963149 (-)3.598e-11
Glyma.11G167100 hypothetical protein NA 1Chr11:16310396–16317417 (+)3.598e-11
Glyma.11G167400 hypothetical protein NA 1Chr11:16491689–16494364 (-)3.598e-11
Glyma.11G167800 hypothetical protein NA 1Chr11:16649420–16666371 (+)3.598e-11
Glyma.11G169500 hypothetical protein NA 1Chr11:18001828–18002310 (+)3.598e-11
Glyma.11G169700 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 1Chr11:18034188–18046104 (-)3.598e-11
Glyma.11G170100 hypothetical protein NA 1Chr11:18127748–18139401 (-)3.598e-11
Glyma.11G170300 hypothetical protein AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 1Chr11:18242402–18247271 (+)3.598e-11
Glyma.11G170700 hypothetical protein AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 1Chr11:18313678–18328202 (-)3.598e-11
Glyma.11G170800 hypothetical protein NA 1Chr11:18343004–18346283 (+)3.598e-11
Glyma.11G170900 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 1Chr11:18345392–18359356 (-)3.598e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.097e-13
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)7.531e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.317e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.655e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)9.908e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.928e-12