Overview Annotation GWAS Evidence Associated genes

P48034

Metabolite ID
P48034
Deionized mass
199.1920 Da
Average m/z
200.1999
Average RT
25.0523
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
141
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

141 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)2.233e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.645e-12
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)2.892e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)6.881e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 3Chr10:48805999–48811533 (-)3.038e-12
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 3Chr19:5178930–5212367 (+)5.976e-11
Glyma.07G078000 hypothetical protein NA 2Chr07:7121636–7126695 (+)5.403e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)5.738e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.932e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.932e-14
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)5.05e-13
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 2Chr18:51943730–51947645 (+)4.412e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.645e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.968e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.987e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)2.892e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)7.58e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)2.302e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.901e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.193e-12
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)1.269e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)2.711e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)1.652e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)1.78e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)1.487e-13
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.439e-16
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.69e-19
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)4.636e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.003e-12
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)6.128e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.824e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)4.276e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.416e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.555e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.311e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.311e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.394e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.186e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.186e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.186e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)4.664e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.036e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.013e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.94e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.79e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.401e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.401e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.401e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.239e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.928e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.928e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.036e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)6.334e-11
Glyma.07G077900 hypothetical protein NA 1Chr07:7116774–7117750 (+)7.189e-11
Glyma.07G080900 hypothetical protein NA 1Chr07:7381339–7405785 (+)7.862e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)1.892e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)8.943e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.944e-12
Glyma.08G132700 hypothetical protein NA 1Chr08:10163807–10167725 (-)9.942e-11
Glyma.08G227900 hypothetical protein NA 1Chr08:18551920–18567339 (-)3.767e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)5.457e-13
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)5.457e-13
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)8.441e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.752e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.948e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)7.556e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.073e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.073e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.073e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.073e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.611e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.077e-14
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 1Chr10:48858818–48862498 (-)9.079e-13
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.797e-15
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)5.14e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)3.086e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.068e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.712e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.712e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.712e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.713e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)7.541e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)7.541e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)7.541e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.637e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.637e-13
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)3.186e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.629e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.629e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.224e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.743e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.743e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)5.382e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.932e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.932e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.582e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.586e-13
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)3.707e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.237e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.274e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.359e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.937e-15
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)6.924e-12
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)2.604e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.019e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.098e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.019e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.019e-12
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)9.457e-13
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)4.072e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)4.072e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)2.581e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.044e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.704e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.007e-12
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)1.648e-12
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)4.852e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.626e-11
Glyma.16G159100 hypothetical protein NA 1Chr16:31889835–31894662 (+)4.292e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)3.475e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.174e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)2.814e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)9.201e-12
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)3.457e-12
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)3.457e-12
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)6.405e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.214e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.214e-12
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)6.388e-11
Glyma.19G032500 hypothetical protein NA 1Chr19:4140729–4141955 (-)4.153e-11
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)7.399e-12
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 1Chr19:5224298–5228610 (-)5.976e-11
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 1Chr19:5321094–5324327 (+)5.976e-11
Glyma.19G038300 hypothetical protein NA 1Chr19:5381177–5383149 (+)5.976e-11
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 1Chr19:5386122–5388865 (+)5.976e-11
Glyma.19G040100 hypothetical protein AT3G02460:AT3G02460:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr19:5773912–5781906 (-)8.658e-11
Glyma.19G041000 hypothetical protein NA 1Chr19:5964641–5965947 (-)8.658e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)5.651e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)4.77e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.385e-14
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 1Chr20:45791239–45803369 (-)8.586e-12