Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47222

Metabolite ID
P47222
Deionized mass
579.2783 Da
Average m/z
580.2835
Average RT
24.6276
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)9.249e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)5.784e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.173e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.173e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.653e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.805e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.977e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.384e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.983e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.983e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.386e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.684e-12
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)3.409e-11
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)8.813e-11
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)6.114e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)8.228e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)9.249e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)9.249e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.857e-13
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)5.969e-13
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)5.969e-13
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)4.297e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)2.294e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)3.818e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)7.702e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.526e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.082e-15
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)2.893e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.449e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.874e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.874e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.191e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.552e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)8.161e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.481e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.481e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.173e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)8.667e-11
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)8.236e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)4.821e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)5.902e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)5.784e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.211e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.211e-16
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.654e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.12e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.751e-11