Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P46921

Metabolite ID
P46921
Deionized mass
552.7296 Da
Average m/z
553.7366
Average RT
24.4113
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 4Chr01:50404781–50436297 (-)2.144e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)4.245e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.259e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.465e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.186e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.961e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.142e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.142e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.142e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.142e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.142e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.142e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.142e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)4.245e-11
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)2.032e-11
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)2.032e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.901e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.901e-12
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)9.149e-12
Glyma.02G108500 hypothetical protein AT1G69580:AT1G69580:Homeodomain-like superfamily protein 1Chr02:10349252–10351608 (-)7.054e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)7.059e-14
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)6.079e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.408e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.283e-11
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)3.361e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.136e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.455e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.455e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.455e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.864e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.158e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.158e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.161e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.161e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.528e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.363e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.541e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.541e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.462e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.3e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.721e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)8.19e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.088e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.628e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.628e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.628e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.628e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.406e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.465e-13
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)2.55e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.362e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.693e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.058e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.058e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)9.008e-11