Overview Annotation GWAS Evidence Associated genes

P45888

Metabolite ID
P45888
Deionized mass
428.2231 Da
Average m/z
429.2283
Average RT
23.6246
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
36
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

36 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)3.436e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.436e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.12e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.628e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.598e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.598e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.989e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)9.992e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.603e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.724e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.249e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)8.365e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.477e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.501e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.676e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.676e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.676e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.676e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.71e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.71e-11
Glyma.13G183400 hypothetical protein NA 1Chr13:29666942–29670201 (+)6.942e-11
Glyma.13G184000 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 1Chr13:29775320–29779417 (+)3.831e-11
Glyma.13G185100 hypothetical protein NA 1Chr13:29904498–29911738 (+)3.247e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.856e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.679e-11
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)1.454e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.911e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)3.436e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)3.436e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.755e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)6.545e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)9.257e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)4.707e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)6.929e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)1.174e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.256e-11