Overview Annotation GWAS Evidence Associated genes

P45610

Metabolite ID
P45610
Deionized mass
105.0777 Da
Average m/z
106.0852
Average RT
23.4602
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.003e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.505e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.761e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.345e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)1.557e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.557e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.581e-11
Glyma.06G324300 GmCSyGT1 NA 1Chr06:51189321–51193954 (-)3.097e-12
Glyma.07G067000 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr07:6032415–6036498 (-)8.913e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)9.456e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.486e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.641e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.894e-13
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)3.529e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)3.529e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)2.204e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.985e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.985e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.459e-12