Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45384

Metabolite ID
P45384
Deionized mass
432.2610 Da
Average m/z
433.2683
Average RT
23.3218
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
82
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

82 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.831e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)9.358e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)9.357e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)9.359e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.776e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.031e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)3.328e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.627e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.068e-13
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)3.001e-11
Glyma.19G128200 hypothetical protein NA 2Chr19:38739769–38743404 (+)1.57e-13
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)2.236e-11
Glyma.01G047300 hypothetical protein AT1G27090:AT1G27090:glycine-rich protein 1Chr01:5514127–5517339 (+)9.3e-11
Glyma.01G047500 hypothetical protein NA 1Chr01:5528742–5532260 (-)9.3e-11
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)8.275e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)8.275e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)9.023e-15
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.48e-18
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.385e-16
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.054e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.702e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)9.984e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)9.984e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)9.984e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)9.984e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)9.984e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)9.984e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)9.984e-12
Glyma.01G222700 hypothetical protein AT1G64060:RBOH F:respiratory burst oxidase protein F 1Chr01:55163018–55172994 (+)9.93e-11
Glyma.02G120600 hypothetical protein AT1G31690:AT1G31690:Copper amine oxidase family protein 1Chr02:11889104–11895861 (+)2.34e-11
Glyma.02G120700 hypothetical protein NA 1Chr02:11904074–11910578 (+)3.088e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.364e-13
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)1.831e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.247e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.738e-14
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)9.315e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)3.381e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.831e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.831e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.232e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.643e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.894e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.709e-13
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)9.359e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)9.359e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)9.359e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)9.359e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)9.359e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.243e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.243e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.243e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.243e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)1.032e-11
Glyma.11G236800 hypothetical protein AT5G09360:LAC14:laccase 14 1Chr11:33157016–33161441 (+)4.219e-11
Glyma.11G237100 hypothetical protein NA 1Chr11:33172417–33173178 (+)4.219e-11
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)3.049e-11
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 1Chr12:285588–289372 (-)1.38e-11
Glyma.12G003900 hypothetical protein AT5G51550:EXL3:EXORDIUM like 3 1Chr12:302437–304546 (+)1.832e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)7.215e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.035e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.505e-13
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.192e-13
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)3.265e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)6.59e-13
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)7.286e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.625e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.721e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)4.083e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.88e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.155e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.155e-12
Glyma.18G044100 hypothetical protein NA 1Chr18:3809348–3812858 (-)1.161e-13
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 1Chr18:3813589–3817289 (-)1.161e-13
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)6.723e-11
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)5.59e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.627e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)4.209e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)4.209e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.849e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.849e-15
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)3.038e-14
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)7.307e-11