Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45219

Metabolite ID
P45219
Deionized mass
199.1300 Da
Average m/z
200.1370
Average RT
23.1094
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G181200 hypothetical protein NA 5Chr16:34216133–34221470 (-)1.815e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.855e-16
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)1.963e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.826e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.321e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.231e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.215e-15
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)4.315e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.947e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)7.734e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.726e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.839e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.009e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.435e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.435e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.435e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.435e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.073e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.094e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.205e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)8.572e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)8.572e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)8.572e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)8.572e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)9.473e-14
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.78e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.78e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.348e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)5.88e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)6.181e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.523e-14
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.286e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.077e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.855e-16
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)4.378e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.893e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.893e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.893e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.123e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.907e-11
Glyma.16G181400 hypothetical protein NA 1Chr16:34235676–34241922 (-)1.815e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)4.216e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.826e-13