Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44896

Metabolite ID
P44896
Deionized mass
610.3330 Da
Average m/z
611.3415
Average RT
22.9447
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.953e-15
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.995e-11
Glyma.16G106200 hypothetical protein NA 3Chr16:21463300–21469532 (+)5.732e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 2Chr16:21495147–21497932 (+)5.256e-13
Glyma.16G111100 hypothetical protein NA 2Chr16:24438458–24444801 (+)2.953e-15
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 2Chr16:24720965–24731678 (-)4.274e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)4.917e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.995e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.438e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)7.984e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)1.874e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.591e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.431e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.028e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.843e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.201e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.201e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.201e-11
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)1.438e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.982e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.982e-13
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)5.847e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.928e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.119e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.928e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.928e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.119e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.624e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)8.577e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.544e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.161e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)3.778e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.662e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)2.546e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)2.546e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)2.546e-12
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)3.501e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.863e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.851e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.745e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.745e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.987e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.011e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.987e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.987e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.203e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.939e-15
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)4.548e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)2.786e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)2.786e-11
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 1Chr16:24455709–24466236 (+)6.134e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)1.499e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.438e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.253e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)3.852e-12
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)3.127e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.143e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.143e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)8.001e-11