Overview Annotation GWAS Evidence Associated genes

P44783

Metabolite ID
P44783
Deionized mass
682.3885 Da
Average m/z
683.3983
Average RT
22.8495
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G085900 hypothetical protein AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760) 1Chr03:25280967–25285887 (-)2.496e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.211e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.642e-11
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)4.885e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)7.036e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.405e-12
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 1Chr12:38789187–38797498 (+)6.065e-11
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)4.608e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)6.874e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)6.874e-11
Glyma.16G105900 hypothetical protein NA 1Chr16:21413295–21415501 (+)1.929e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)6.874e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.929e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)5.553e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.822e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)9.087e-12