Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44016

Metabolite ID
P44016
Deionized mass
1718.8873 Da
Average m/z
860.4546
Average RT
22.3923
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.043e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)9.088e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)8.17e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)7.229e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.881e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.326e-17
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.125e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.85e-15
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.127e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.83e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.83e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.83e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.77e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.219e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.104e-14
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)3.108e-12
Glyma.08G142200 hypothetical protein NA 1Chr08:10833827–10834390 (-)1.524e-11
Glyma.08G142400 WRKY6 WRKY transcription factor 6 NA 1Chr08:10843433–10846761 (-)1.524e-11
Glyma.08G142500 hypothetical protein NA 1Chr08:10848944–10850129 (+)8.667e-11
Glyma.08G142900 hypothetical protein AT2G21860:AT2G21860:violaxanthin de-epoxidase-like protein 1Chr08:10869437–10872439 (+)1.734e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)1.167e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)1.167e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)5.761e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.522e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.987e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.394e-14
Glyma.11G060700 hypothetical protein NA 1Chr11:4569714–4571506 (+)7.883e-11
Glyma.11G061000 hypothetical protein AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:4576441–4579697 (+)2.831e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)6.421e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.297e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.297e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.795e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.795e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.104e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.76e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.784e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.776e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.514e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.828e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.087e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)6.303e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.043e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.305e-15
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.305e-15
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.368e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)3.498e-11