Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44007

Metabolite ID
P44007
Deionized mass
688.8469 Da
Average m/z
689.8503
Average RT
22.3887
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)3.651e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)3.65e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)3.651e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.535e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.438e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.438e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.729e-14
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.187e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.113e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.27e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.201e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.201e-11
Glyma.02G107400 hypothetical protein NA 1Chr02:10245905–10246706 (-)3.96e-11
Glyma.03G016900 hypothetical protein NA 1Chr03:1702419–1707451 (+)4.352e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)7.262e-11
Glyma.03G022400 hypothetical protein NA 1Chr03:2334661–2335316 (+)9.752e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.719e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.918e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)9.021e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.331e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.86e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.358e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.358e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.492e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.76e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.381e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.989e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.021e-13
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)3.651e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)3.651e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)3.651e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)3.651e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)3.651e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)8.296e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.952e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.952e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.196e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.196e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.719e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.424e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.594e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.594e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.438e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.267e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.192e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.357e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.273e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.47e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.47e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.834e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)3.155e-17
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.299e-15
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)1.329e-12
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)4.755e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.838e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.838e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.311e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.003e-11