Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43487

Metabolite ID
P43487
Deionized mass
576.3604 Da
Average m/z
577.3678
Average RT
22.0896
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)7.794e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.033e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.033e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)5.918e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)6.711e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.275e-14
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)8.006e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)9.952e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)8.237e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.573e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.441e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.103e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.243e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.252e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.252e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.215e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.215e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.96e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.454e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.96e-13
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.96e-13
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.454e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)1.956e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)4.113e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.068e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)4.079e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)7.278e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.302e-12
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)2.484e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)8.164e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.624e-12
Glyma.11G019200 hypothetical protein AT4G23730:AT4G23730:Galactose mutarotase-like superfamily protein 1Chr11:1353056–1355103 (-)4.778e-12
Glyma.11G020900 hypothetical protein NA 1Chr11:1482644–1490708 (+)5.456e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.201e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.201e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.201e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.794e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.033e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.034e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.878e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)7.218e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.218e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)4.81e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)4.628e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)4.629e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.076e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.836e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.076e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.076e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.775e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.212e-15
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)5.918e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.647e-14
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)7.08e-11
Glyma.17G213000 hypothetical protein NA 1Chr17:35353582–35358772 (+)2.602e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)3.244e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)5.072e-11